Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs56326410 | chr14:96057990 | T/C | 1.11E-6 | 211 | 14.83 | 23.63 | 9.77 | KM Plot |
KIRP | rs56337603 | chr6:110796885 | C/T | 5.05E-6 | 210 | 18.02 | 13.03 | 5.57 | KM Plot |
KIRP | rs56359318 | chr1:198117581 | A/G | 5.41E-7 | 213 | 14.68 | 33.13 | 13.65 | KM Plot |
KIRP | rs56401801 | chr6:27301512 | T/A | 1.31E-6 | 209 | 17.13 | 13.12 | 7.32 | KM Plot |
KIRP | rs56405707 | chr6:27640246 | G/A | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
KIRP | rs56756183 | chr7:45226907 | G/A | 0.000276 | 214 | 15.2 | 19.33 | 9.43 | KM Plot |
KIRP | rs56756262 | chr10:75589493 | A/G | 9.86E-6 | 206 | 16.48 | 18.03 | 5.57 | KM Plot |
KIRP | rs56819508 | chr16:47332998 | C/T | 2.44E-5 | 212 | 17.17 | 12 | 16.43 | KM Plot |
KIRP | rs56983102 | chr4:76604110 | T/C | 8.55E-5 | 211 | 14.32 | 17.12 | 16.43 | KM Plot |
KIRP | rs57319506 | chr3:50285677 | T/C | 0.000101 | 214 | 15.75 | 19.5 | 7.13 | KM Plot |
KIRP | rs57347504 | chr21:42678481 | A/G | 0.000303 | 206 | 16.73 | 13.23 | 8.87 | KM Plot |
KIRP | rs57556343 | chr16:369226 | G/A | 6.2E-6 | 211 | 14.97 | 19.83 | 12.3 | KM Plot |
KIRP | rs57593708 | chr20:37225661 | G/GT | 4.44E-16 | 212 | 6.7 | 21.47 | 16.43 | KM Plot |
KIRP | rs57680339 | chr4:76607228 | T/C | 8.55E-5 | 210 | 14.32 | 17.2 | 16.43 | KM Plot |
KIRP | rs57771284 | chr5:79926423 | C/T | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |